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By Michael White | September 9th 2008 04:11 PM | 14 comments | Print | E-mail | Track Comments
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About Michael White

Welcome to Adaptive Complexity, where I write about genomics, systems biology, evolution, and the connection between science and literature, government, and society.

I'm a biochemist


... Full Bio

Imagine that instead of setting out to invent a better lightbulb, Thomas Edison had announced his intention to invent a light-emitting diode that you could use to illuminate your kitchen. This isn't completely far-fetched: the first examples of light-emitting diodes (LEDs) began to appear as early as 1907. But it wasn't until the 1960's and 70's that useful, visible-spectrum LEDs began to appear, and LEDs haven't been used to light kitchens until very recently. Thomas Edison, had he set out to make a useful, household LED, would have been doomed to failure beacause it would be years before basic science made the necessary technologies possible.

When Richard Nixon declared the conquest of cancer "a national crusade" in 1971, cancer researchers were inevitably set up to be viewed as failures. Although at the time the recent molecular biology revolution led people to think that disease conquest was just around the corner, now we can look back and see that the War on Cancer had no hope of achieving its goals in the 1970's. Scientists are being punished for that hubris now, in the form of misguided news pieces such as Newsweek's current exposé: "We Fought Cancer...And Cancer Won".

Cancer won? That would be news to my physician friends at the Washington University Medical School, who treat problems ranging from childhood brain cancer to adult leukemia. Their jobs are satisfying, they tell me, because today more cancers are treatable, and even curable, than ever before. Since 1977, the 5-year US cancer survival rate (covering all cancers, both genders, and all races) have gone from less than 50% to more than 65%, and in specific cancers the success rate has increased even more dramatically.



Data from the National Cancer Institute SEER Cancer Statistics Review


And yet, because we haven't "cured cancer" researchers continue to get slammed by news pieces that confuse the role of basic science and clinical treatments. The hope in the 1970's was that basic research would quickly lead to cures, but that hope was misplaced, in part because the basic research necessary was not in place. In contrast with the World War II Manhattan project to build the first atomic bomb, which succeeded because the basics of nuclear physics had already been worked out beforehand, War on Cancer advocates were making promises about treatments based on science that had not yet been done. For decades, we didn't know the molecular players involved, and it hasn't been until the recent, genome-era advances that we've had a real hope of identifying all of the important cancer-related genes and understanding how they work together.

One major problem was that scientists severely underestimated the complexity of cancer. While it's true that all cancers are diseases of uncontrolled cell division, the molecular details are very different for each cancer type. Newsweek scoffs at this idea, but it's a fact: cancer is really many diseases, and there will never be a single breakthrough cure applicable to all cancers. There is no magic bullet. As one scientist in the Newsweek piece put it, you don't need to wait for the home run - "sometimes you get runs by hitting singles and doubles."

Because of the lack of home runs, Newsweek is suggesting that we've spent a whole lot of money to get very little:

"Indeed, it is possible (and common) for cancer researchers to achieve extraordinary acclaim and success, measured by grants, awards, professorships and papers in leading journals, without ever helping a single patient gain a single extra day of life. There is no pressure within science to make that happen. It is no coincidence that the ratio of useful therapy per basic discovery is abysmal. For other diseases, about 20 percent of new compounds arising from basic biological discoveries are eventually approved as new drugs by the FDA. For cancer, only 8 percent are."

This is an incredibly misplaced criticism which demonstrates a complete misunderstanding of how science works, and how it is related to medicine. Most researchers don't treat patients, because treating patients does not advance basic research. It should be obvious that to understand the molecular details of cancer we need people who are trained to study molecular biology, not people who diagnose patients. I am funded by the American Cancer Society, and I haven't helped "a single patient gain a single extra day of life." But will my research help treat or cure cancer? Not in the next 5 years. But if it's successful it will: it will help us model how the control machinery goes awry in cancer cells, and thus design better, multi-pronged strategies to shut down those cells. I don't see how you can design comprehensive, rational strategies to tackle cancer without such knowledge, knowledge which has only become possible within the last few years.

The other ridiculous notion put forward by Newsweek is that we have some quantified, optimal "ratio of useful therapy per basic discovery", and that the ratio we're getting is not what we should be getting. How do you measure such a ratio? Not by looking at FDA approved "new compounds", because most basic biological research isn't aimed at producing new compounds. Biotech companies, drug companies, and some university labs are screening libraries of chemicals to find new drugs, but this work is not about "basic discovery", and is thus a poor metric of how fruitful basic research really is. It is hard to find good new cancer drugs, in part because so many candidates are extremely toxic. Our current success rates are not optimal because people are still dying, but you can't say that we're not getting enough for our money without some objective way of determining how much we should be getting for each dollar spent.

The implication made here by Newsweek is that basic research is either a wasteful way to achieve cancer cures, or basic researchers aren't choosing the right problems to work on. It's unlikely however that cancer treatments will get better over the long-term if we start spending basic research money elsewhere - basic research is the only rational strategy we have; the alternative is sheer trial and error.

The key to making use of our rapidly growing molecular understanding of cancer is to design a coherent, multi-pronged chemical strategy. Previously we only had the carpet-bombing techniques of radiation and non-specific chemotherapy cocktails. Recently, new-generation cancer drugs such as Tarceva and Gleevec have become available, which target individual proteins known to play a role in cancer. For some cancers these drugs have worked quite well. But as Newsweek points out, "cancer cells are like brilliant military tacticians: when their original route to proliferation and invasion is blocked, they switch to an alternate, marching cruelly through the body without resistance."

This means that an effective drug treatment for many cancers will have to be based on a mixed strategy, such a drug regimen targeting not just one protein, but a combination of molecular players. Strategies like this can only be rationally designed when we actually understand how those molecular players work together. Basic researchers have been making steady progress towards that goal, but as I noted above, it is only within the last few years that genomics and computational biology have made such an understanding possible. And this understanding is not only relevant to cancer - the lessons we learn will be relevant to most disease.

The basic research will get there. It needs to be funded but not forced into preconceived notions of what success will look like. It's true that basic research can be frustratingly slow. The science of nuclear physics was worked on for decades before the first reactor was ever built, and cancer is more complex than a nuclear reactor.

In the mean time, it's clear that basic research isn't the only solution. Epidemiology has scored some big successes by linking smoking and hormone-replacement therapy to cancer. We can continue to significantly improve cancer prevention by identifying environmental factors, but in the end there will still be a large subset of cancers that are only weakly linked to environmental factors. Those cancers will not be solved by campaigns to quit smoking or use sunscreen.

Is our basic research enterprise wastefully working in the wrong direction? Have scientists missed critical ideas that a Newsweek journalist has discovered? Are we just coming up with more molecular details that will "join the long list of those that are interesting but irrelevant to patients"?

Don't count on it. While we should keep in mind exaggerated promises made by scientists 35 years ago, we need to also see that those promises were made long before any of the basic science was in place. Edison wasn't about to produce a kitchen LED, and no scientist in 1970 had a clue about the complex molecular machinery underlying cancer. But we eventually did build LEDs, and we now know an amazing amount about the genetics of cancer. Cancer survival rates are up. While there may never be an Armistice Day in the War on Cancer, the progress is real, and basic research, while not hitting home runs, can still win the game with singles and doubles.

Comments

Gerhard Adam's picture
I think this was a good article and is an aspect of cancer treatment that is often overlooked. Unfortunately the linkage between the public and cancer is through the medical community and not research. Often we see debilitating treatments of patients that result in the patient having a grossly diminished quality of life, while the physician's are touting it as successful survival. Many people have serious doubts about even accepting treatment if they're diagnosed out of the fear that they will spend the remaining years of their life in pain or seriously compromised (not to mention the ruinous medical bills that accompany such efforts). I remember my own father dying from cancer and receiving a "survivor's pin" just a few weeks before he died. The cancer had metastisized and there was nothing more to be done, however there was still talk about more chemotherapy despite a reluctant admission that it likely wouldn't help. The final insult came when the medical bills came from the insurance company and you could see the tens of thousands of dollars that were paid that ultimately failed. While it isn't the fault of the researchers or the doctor's specifically, there is an aura of doom associated with the actual diagnosis which makes it hard to get excited about any advances. I think there are far more people that have a "survivor's" horror story to tell, than those that have a successful "cure" story. If you ask the average person, you'll likely hear the view that cancer treatment is nothing more than torturous. From the people I've know that have died of cancer, there isn't a one that didn't suffer more from the treatment than the disease itself. In the end, none survived anyway. In truth the origin of such stories is largely caused by the hubris of the medical community itself. For whatever reason that has been a sense that modern medicine can do almost anything and consequently when it can't, disappointment turns to frustration which turns to blame. I think it's time for the medical community to be more open about their capabilities and not be so focused on the economics of things. It is precisely this lack of seriousness which has given rise to the huge increase in elective surgeries because individuals feel that there is no risk in modern medicine, but rather it is only an issue of "getting what you pay for". So while the entire issue is more complex than I've alluded to, I'm really suggesting that this is as much an issue of patient expectations being set too high rather than what treatments are actually viable.
adaptivecomplexity's picture
I think there are far more people that have a "survivor's" horror story to tell, than those that have a successful "cure" story. If you ask the average person, you'll likely hear the view that cancer treatment is nothing more than torturous.

In a future post it might be useful to break this down by cancer types, because it really depends on the type of cancer. There are many cancers, such as certain types of leukemia, where the rate of complete remission is very high. There are other types where people live on some sort of chemo for years, and it's difficult, but not at the point where you'd say the treatment is worse than dying. And there are instances like the one you described with your father. The NCI breaks survival rates down by cancer type, but I'm not sure they have easily available information on the quality of life of those survivors.

I think it's time for the medical community to be more open about their capabilities and not be so focused on the economics of things

I agree, the medical community should take the lead in telling the public what they don't want to hear. Rather than play to unrealistic expectations, they should let the public know what we can realistically expect. It shouldn't require overselling to get funding for research.

I face this problem in my work. There are very solid reasons to expect that the kind of research I do will improve our ability to diagnose, prevent, and treat disease; in fact, I don't see how we can ever be able to cure most diseases without the kind of knowledge research in my field will generate.

But it is basic research, not applied research, and it can't be forced - we work hard, and as effectively as we can, but when you're probing the unknown, dead ends are inevitable. Funding agencies should acknowledge this, but instead, to please Congress or whomever, we have to come out and say our research will cure this or that. Everyone involved in the process knows better, even the people who make funding decisions - they know basic research is important and relevant, but still we have to play this PR game to get funded.

Mike

Gerhard Adam's picture
I understand, and my comments weren't intended as criticisms but rather observations about the general disconnect between the work being done and the "solutions" being sold. I agree that the funding issue leads to the kind of expectations we've been talking about, because the general opinion seems to be focused only on short-term goals, so unless someone professes to have the solution, there's a general disinterest in pursuing the effort. After all, much of the difficulties this country is facing now are due to the general shortsighedness of decision-makers.
adaptivecomplexity's picture
I didn't read it as criticism - as always, you make very good points that should be raised.

Mike

Hank's picture
It's unfashionable to say so today but I will say it again. The private sector is regarded by academics as the enemy but the greatest science we ever did was done by corporate-funded basic research, not the government.

If billions and billions of dollars had been spent by the private sector on cancer research, no one would be complaining. It's simply buried under R&D, a cost of doing business. But if billions have been spent and taxpayers are still paying for it when people are losing their jobs and houses, realistic initial estimations of progress or not, don't journalists have an obligation to report it?

This has nothing to do with your work, of course, the actual people cost is not the big drain, but I firmly believe if we offered $1 billion to every cancer cured they would get cured - but it would get cured by someone in India where they make $4 microscopes and don't hinder their creativity by saying nothing can be done without huge budgets.

adaptivecomplexity's picture
"But the greatest science we ever did was done by corporate-funded basic research."

I completely disagree - the vast majority of the most important 20th century basic scientific discoveries, in genetics, in biochemistry, in quantum mechanics, in earth sciences, in molecular biology, were made in academic labs, most often with government funding (even before the post-WWII increases).

And much of the non-government funding for this research was not corporation-sponsored - it was through private foundations.

Budgets weren't huge earlier in the century, and people did creative work, but in many fields, it costs a lot to make progress now. Some of the most fundamental questions in particle physics can only be answered with expensive particle accelerators, no matter how creative you are.

The same is true now of certain areas of biology - some questions can only be reasonably answered with genomic tools, which are extremely expensive, in spite of very intense efforts to make genome technologies cheaper.

I agree that if you spend billions on a lost war, people should ask questions...

But my point is that the Newsweek piece mis-characterized what's going on. We're not failing, we're making progress, and basic research has been an important part of that. Also keep in mind that much of that money was spent on research that has been beneficial in many areas - we shouldn't just look at cancer outcomes to determine what these research budgets have produced.

Making a $4 microscope is a technological problem, and at some point, curing cancer will be a technological problem. But understanding how cell division is controlled is not a technological problem, and it has taken three decades of very intense and creative work to achieve the reasonably good understanding we have now.

I don't know of any corporation that would spend three decades and a lot of money on research that would yield them little revenue or intellectual property in the mean time.

Mike

Hank's picture
I don't know of any corporation that would spend three decades and a lot of money on research that would yield them little revenue or intellectual property in the mean time.

We have a 25nM process in the works for semiconductors, something impossible even 10 years ago. Only the private sector could have done it.

I certainly agree a for-profit corporation would not spend 30 years on R&D. My point, and something that the Newsweek article also leads to, is that it might not take 37 years (and counting) if there were both a tangible profit motive abd accountability. It might already have been done.

This is not belittling the contributions of anyone (obviously - or I wouldn't be doing what I do) but a corporation with money to gain that won't have a never-ending supply if someone gets it first is motivated. There are absolutely uplifting stories out there of people doing magnificent work, the kinds of stories that inspire us all to be better people and give a crap about someone else, but I say again that if journalists are expected to hold governments accountable for the cost of an Iraq War, a War on Cancer has to have accountability also. And there isn't much. Anyone saying that curing cancer needs to be quantified is going to get a brick through his window - and that isn't good for a society.

adaptivecomplexity's picture
My point, and something that the Newsweek article also leads to, is that it might not take 37 years (and counting) if there were both a tangible profit motive and accountability. It might already have been done.

This is where we disagree on the state of the science. I don't think anyone 30 years ago, before we knew anything about cell division control, could have solved this, even with a huge profit motive, any more than Oppenheimer could have built an atomic bomb in 1925.

The scientific community was wrong in 1971 to frame this issue as an applied science problem, to say 'given enough money and focused research, we will crack cancer.' With the current state of knowledge at the time, it was never going to work as an applied science endeavor. It sets up criticisms like that found in the Newsweek piece - "we gave you billions of dollars to cure cancer and you haven't cured it, so where did all the money go?"

What scientists should have said (and what we should be saying now for some of today's cancer research work) is that we need to significantly advance our state of knowledge in order to come up with effective, rationally designed cures. That means funding basic research, and acknowledging that the money will be used effectively to lay the foundation for tackling all sorts of diseases. That kind of research has resulted in incremental improvements over the last 30 years.

It also means acknowledging that with our current understanding, we can't just straight-out buy a cure for cancer - yet. Some day, hopefully soon, a 'cancer Manhattan project' might be feasible.

And that's where my biggest problem with the Newsweek piece comes in - it ridiculed scientists doing basic research by saying that these non-physicians hadn't saved a single patient's life.

But what's the alternative? I don't see how we're going to come up with smart cures for cancer without understanding many of the genetic players involved. The reason we have a 25nM process for semiconductors is because we have a good understanding of the semiconductor physics. 50 years ago, no matter how much money you threw at the problem, you would not have been able to come up with that process. The same principle holds in biology.

Mike

adaptivecomplexity's picture
Just one last thought - I know you're not trying to belittle anyone's contributions, and I wholeheartedly agree that profit-driven research can achieve great things. I'm not trying to knock the value of corporations.

I do think that there is an important distinction between the kind of basic research that's done in academia, and the applied research and technology development that takes place in corporations. Both are valuable, both involve smart, clever people.

But long-term, basic research is not well-suited to a profit driven atmosphere, and many important technological problems cannot be solved without the foundations laid by long-term academic research.

Mike

Becky Jungbauer's picture
Great article, Mike. I still remember the day I heard for the first time that there is no cure-all for cancer. I was sitting in my graduate cancer class, a level that very few (relatively) get to, and I thought how unfortunate it was that only a select few will ever understand that. Articles like the one in Newsweek aren't doing the general public any favors.

I also agree with the idea that the medical community should discuss more realistic expectations. If people incorrectly assume that test-tube to bed-side is a relatively short process, then hearing a new treatment is still 10 years down the road gets pushed to the back burner in favor of some snake-oil salesman promising the next new revolution. People seem to want results NOW, and aren't willing to wait. But science is all about testing and re-testing and testing again - there's a cultural impasse that needs to be addressed, I think.

...There is a sensitive aura that will always surround a typically unrewarding study, especially one that is a virtual never ending (understandably so) one, as the sliver of hope has to be there for folks like you Mike to hang in there in spite of a high level of failure. Newsweek has to sell magazines and they are not supported by the Scientific community. You have passed those cancers that were easier (more managable) to over come, now new ones or adaptive old ones take their place. While people who are facing the current generation of cancer wait for new defenses, I have to bring up the idea of our food. With so many more people to feed traditional farming practices have given way to Corporate farms and supplimental fertilizer plans that increase the yield per acre of produce but because the land is never allowed to "go fallow" for even one season, the neutrients that come from the "old school" methods of farming are nearly non-existent. This would explain the explosion of the Vitamin/suppliment Industry. I would be willing to bet Mike that if old farming methods were returned to today that in 5-7 years your frustration over deadly and complicated cancers would deminish by half. Not all of the old ways were bad, some were smart.

adaptivecomplexity's picture
The relationship between nutrition and cancer is an interesting one. While my personal focus is on the cellular side, I certainly believe that epidemiological studies that attempt to find links between various environmental or lifestyle factors and cancer can be worthwhile, and the Newsweek piece points out the success such studies when it came to smoking and hormone replacement therapy.

Probably the main problem with most epidemiological is power: factors that have large effects, like smoking, have been well verified by such studies. So far, dietary factors have had smaller effects, which is why it seems like cancer-prevention diet advice seems to change every few years as new studies come out. (That doesn't mean large effects are absent, and like you, I try to be careful about the food I buy.)

One more point: as someone who is not a physician, but a basic science researcher, I don't see the last 30 years of cancer research as experiencing a 'high level of failure' - we have made huge strides in understanding, which is rewarding to the people doing the research. And my physician friends who treat cancer also seem similarly optimistic, because, as the graph above shows, survival rates have gone up.

It is because of the inappropriately high expectations set up in the 1970's that the last 30 years of cancer research is sometimes viewed as a failure. So you make most researchers (myself included) sound more heroic than we actually are - we don't have a hard time hanging in there because we've seen a lot of progress in the science.

Mike

Hank's picture
One more point: as someone who is not a physician, but a basic science researcher, I don't see the last 30 years of cancer research as experiencing a 'high level of failure' - we have made huge strides in understanding, which is rewarding to the people doing the research.

Indeed, there was some 3500 years of 'basic research' in understanding gravity before Newton put it all together.

He 'stood on the shoulders of giants' but most people don't know their names. It may well be the same in cancer research, in 5 years or 50. A lot of work by a lot of people will be involved in the 'epiphany' that one man may have that unlocks the puzzle.

Great article Mike. I have to agree with you. I think Newsweek was out of line and the journalist did not do the public any good by putting scientists and research down on all levels without looking at the complexity of cancer. Knowing WHY all cancers are so distinct and hard to fight has to include a serious talk about epidemiological studies and simple but sizeable funding. The STAND UP TO CANCER show was excellent for awareness of the disease as well as monetary support. It was encouraging seeing so many survivors and feeling like you could be part of a plan to lessen your risk of cancer and help those with cancer. A lot of money was raised and we want to believe it will help those we love in the future and NOW. I feel as if this article in Newsweek should have been to share more about the types of cancer and the many ways people have beaten it or at least putting the giant to sleep for a long time (remission). Funding is good but people in this economic downhill train we are all on are wanting results for the money they spend. Cancer is real and it is taking many lives and changing lives every day. Inspiring people to invest and having the government match or raise those funds instead of funding the war so diligently might help in this fight against cancer. The number of people that die from cancer far exceeds the importance of war in my noble personal opinion. As a female recently diagnosed with breast cancer, I wish that the Newsweek article would have been more specific about the types of cancer and how research has been good for some cancers but others that are more complex, not so good. Why put down all treatments when there are some success stories in every cancer type. Quality of life is important whether you have cancer or not. Treatments might not be fun but if you survive them, they can help prolong your life and if you live long enough, maybe there can be a piece of a cure for you too. People know the downside of a cancer diagnosis and what it does to families and cancer victims lives. We don’t need it to be told to us by a journalist albeit a biased one at that. This journalist is just a member of the press with no background or foreground in anything having to do with cancer, its research, or science itself. Speaking with hospitals like John Hopkins or University of Chicago cancer clinic doctors would have done the Newsweek article some justice. Truth be told, cancer kills but a couple success stories would give those living with cancer or those who have lost their fight with cancer leaving loved ones behind, at least some solace and peace. We don’t want to think that our struggles are lost in vain or that the people we have lost didn’t get the right treatment because of money, greed, stinginess, or power. People want hope. Simple hope and support. On that note, wish me luck in my quest for some comfort during my journey dance with cancer.

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